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Are GES carbapenemases underdiagnosed? An allelic discrimination assay for their accurate detection and differentiation

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 207 ()

GES (Guiana Extended Spectrum) carbapenemases belong to minor class A carbapenemases and its prevalence could be underestimated due to the lack of spe......

Differentiation of Salmonella vaccinated and infected animals by serological detection of antibody to T3SS effector SsaK in an indirect ELISA

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 209 ()

The differentiation of animals that are vaccinated and those that are naturally infected with Salmonella is difficult by conventional serological test......

Quantitative investigation of the bacterial content of periodontal abscess samples by real-time PCR

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 213 ()

Objectives: Periodontal abscesses, which are part of the acute periodontal disease group characterized by the destruction of periodontal tissue with d......

Comparison of disk diffusion and broth microdilution methods for antimicrobial susceptibility testing of Campylobacter isolates of meat origin

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 204 ()

The aim of this study was to compare the disk diffusion (DD) and the broth microdilution (BMD) methods in determining the antimicrobial susceptibility......

Eco-friendly degradation of reactive red 195, reactive blue 214, and reactive yellow 145 by Klebsiella pneumoniae MW815592 isolated from textile waste

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 204 ()

The water is used in many textile manufacturing steps beyond cleaning. The quantity and the significant chemical load of the effluents generated const......

PCR based early detection and antibiotic resistance pattern of Salmonella Gallinarum isolates from Pakistan poultry

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 208 ()

The poultry industry in developing countries is still combating mortality and economic loss due to Salmonella contamination. Salmonella Gallinarum is ......

Direct Xylella fastidiosa whole genome sequencing from various plant species using targeted enrichment

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 208 ()

A targeted enrichment method was developed to sequence Xylella fastidiosa genomic DNA directly from plant samples. The method was evaluated on various......

Removal of different vat dyes by Aspergillus niger: A comparative study focusing on the molecular structure

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 208 ()

Vat dyes are the most commonly used dyes in the denim industry. Since the pollution of the textile industry is a worldwide problem, Aspergillus niger ......

Removal of arsenic from acidic liquors using chemical and autotrophic and mixed heterotrophic bacteria-produced biogenic schwertmannites

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 211 ()

Arsenic penetrates human society through a variety of geological and anthropogenic processes, posing significant health hazards. Acid mine drainage, w......

Novel standard biodegradation test for synthetic phosphonates

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 212 ()

Determination of biodegradation of synthetic phosphonates such as aminotris(methylenephosphonic acid) (ATMP), ethylenediamine tetra(methylenephosphoni......

Validation of digital PCR assay for the quantification of Mycobacterium avium subsp. paratuberculosis in bovine faeces according to the ISO 20395:2019

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 213 ()

Paratuberculosis is an enteric disease caused by Mycobacterium avium subs. Paratuberculosis (MAP). Quantifying the load of MAP in faeces samples offer......

Microcalorimetric growth behavior of E. coli ATCC 25922 in an MCDSC

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 205 ()

Isothermal microcalorimetry can provide a general analytical tool for the characterization of bacterial growth. Methodologies and equipment have been ......

A novel procedure for CFU plating and counting

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 206 ()

We present a novel method to automate plating for the Colony Forming Unit (CFU) counting procedure. The apparatus we developed for the application of ......

Culturing clinical Methanobrevibacter smithii using GG medium in a minimal anaerobe atmosphere.

期刊: JOURNAL OF MICROBIOLOGICAL METHODS, 2023; 207 ()

Methanobrevibacter smithii (M. smithii), the most prevalent and abundant gut methanogen, detoxifies hydrogen into methane and is, therefore, of paramo......

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